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configuration
Also start build collection from scratch on package version replacement.
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dependency selection
Also fix the dependency alternative selection so that if the dependency
package of a different version is already being built, then make sure that one
of them is satisfactory for all the dependents and don't consider this
alternative if that's not the case.
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configuration variables are specified for dependent
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manifests
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Also make some cleanups (always probe URLs prior to git-ls-remote, use peeled
reference ids to identify repository fragments, etc).
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